The reading of the 2nd temperature sensor is not directly supported in the WinCe BSP.
However, it is not too hard to implement:
The temperature sensor is located inside the STMPE811 chip, which we also use for resistive touch functionality. This chip is connected to the i.MX6 through an internal i2c bus.
Our ToradexCeLibraries support accessing this internal i2c bus through the logical port L"i2c9".
The STMPE811’s i2c slave address is 0x41.
So Just use the I2c library read the raw temperature values according to the STMPE811 datasheet.